Isolation and characterization of IgG3 glycan-targeting antibodies with exceptional cross-reactivity for diverse viral families.

Isolation and characterization of IgG3 glycan-targeting antibodies with exceptional cross-reactivity for diverse viral families.

Publication date: Sep 01, 2024

Broadly reactive antibodies that target sequence-diverse antigens are of interest for vaccine design and monoclonal antibody therapeutic development because they can protect against multiple strains of a virus and provide a barrier to evolution of escape mutants. Using LIBRA-seq (linking B cell receptor to antigen specificity through sequencing) data for the B cell repertoire of an individual chronically infected with human immunodeficiency virus type 1 (HIV-1), we identified a lineage of IgG3 antibodies predicted to bind to HIV-1 Envelope (Env) and influenza A Hemagglutinin (HA). Two lineage members, antibodies 2526 and 546, were confirmed to bind to a large panel of diverse antigens, including several strains of HIV-1 Env, influenza HA, coronavirus (CoV) spike, hepatitis C virus (HCV) E protein, Nipah virus (NiV) F protein, and Langya virus (LayV) F protein. We found that both antibodies bind to complex glycans on the antigenic surfaces. Antibody 2526 targets the stem region of influenza HA and the N-terminal domain (NTD) region of SARS-CoV-2 spike. A crystal structure of 2526 Fab bound to mannose revealed the presence of a glycan-binding pocket on the light chain. Antibody 2526 cross-reacted with antigens from multiple pathogens and displayed no signs of autoreactivity. These features distinguish antibody 2526 from previously described glycan-reactive antibodies. Further study of this antibody class may aid in the selection and engineering of broadly reactive antibody therapeutics and can inform the development of effective vaccines with exceptional breadth of pathogen coverage.

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Concepts Keywords
Antibodies Antibodies, Monoclonal
Coronavirus Antibodies, Monoclonal
Envelope Antibodies, Viral
Mutants Antibodies, Viral
COVID-19
Cross Reactions
HIV Infections
HIV-1
Humans
Immunoglobulin G
Immunoglobulin G
Polysaccharides
Polysaccharides
SARS-CoV-2
Spike Glycoprotein, Coronavirus
Spike Glycoprotein, Coronavirus

Semantics

Type Source Name
disease IDO cell
pathway KEGG Influenza A
disease MESH influenza
drug DRUGBANK Mannose
disease IDO pathogen
disease MESH Communicable Diseases
disease MESH Infection
disease MESH Inflammation
disease MESH Tumor
disease IDO immunodeficiency
pathway REACTOME Reproduction
disease MESH hepatitis
disease IDO protein
disease IDO host
drug DRUGBANK Glycine
disease IDO assay
disease IDO site
drug DRUGBANK Cysteamine
drug DRUGBANK L-Lysine
drug DRUGBANK L-Arginine
drug DRUGBANK Glutamic Acid
drug DRUGBANK L-Aspartic Acid
drug DRUGBANK L-Alanine
drug DRUGBANK L-Asparagine
disease MESH tic
disease MESH Weight loss
disease IDO process
disease MESH COVID 19 pandemic
drug DRUGBANK Indoleacetic acid
drug DRUGBANK Poloxamer 188
disease IDO reagent
drug DRUGBANK Ranitidine
drug DRUGBANK Tromethamine
drug DRUGBANK Serine
disease MESH point mutation
drug DRUGBANK Proline
drug DRUGBANK Histidine
drug DRUGBANK Cobalt
drug DRUGBANK Imidazole
drug DRUGBANK Sodium lauryl sulfate
drug DRUGBANK Amino acids
disease MESH Parainfluenza
disease MESH Dengue
drug DRUGBANK Immune Globulin Human
drug DRUGBANK Pentaerythritol tetranitrate
drug DRUGBANK Streptomycin
drug DRUGBANK Formaldehyde
drug DRUGBANK Gentian violet cation
drug DRUGBANK Water
pathway REACTOME Digestion
drug DRUGBANK Urea
drug DRUGBANK Trypsin
drug DRUGBANK Chymotrypsin
drug DRUGBANK Formic Acid
drug DRUGBANK Flunarizine
drug DRUGBANK Thyroglobulin
drug DRUGBANK Glycerin
drug DRUGBANK Nitrogen
disease IDO facility
disease IDO blood
disease MESH AIDS
drug DRUGBANK Cardiolipin
disease MESH HIV Infections

Original Article

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